﻿WEBVTT

1
00:00:05.550 --> 00:00:10.932
In the first video we mentioned <i>Trichoplax </i>
<i>adhaerens</i> and on the side we mentioned


2
00:00:11.232 --> 00:00:14.415
 there's another two species 
just recently described.


3
00:00:14.760 --> 00:00:19.472
But we know from genetic evidence 
there's probably more than a dozen 


4
00:00:19.772 --> 00:00:24.404
more than 100 species out there, 
possibly. They just look all the same. 


5
00:00:24.704 --> 00:00:29.601
We need genetics to identify them and we
need new tools to assign them to a species. 


6
00:00:29.901 --> 00:00:34.975
So if we collect here at Banyuls in this 
water, first, chances are we're gonna


7
00:00:35.275 --> 00:00:40.236
find <i>Trichoplax adhaerens</i>. But there's 
a good chance we'll also find another 


8
00:00:40.536 --> 00:00:43.701
species or even two or three more 
species. We just don't know yet.


9
00:00:43.901 --> 00:00:47.693
There are some regions like the Mediterr
-anean sea that are very well-sampled.


10
00:00:47.970 --> 00:00:51.540
And there's other regions they have 
not been sampled at all. For example, 


11
00:00:51.840 --> 00:00:57.709
South America and all the coast of 
Africa have not been sampled at all yet. 


12
00:00:58.009 --> 00:01:03.175
So the biodiversity is unknown, please 
when you go someplace to temperate 


13
00:01:03.475 --> 00:01:07.455
or warm oceans, take some rocks with 
biofilm and send them to our lab.


14
00:01:07.955 --> 00:01:11.540
 So as I just said the biodiversity 
we expect from placozoans


15
00:01:12.220 --> 00:01:14.580
derives from genetic data﻿.


16
00:01:15.490 --> 00:01:20.723
Morphologically the most of them look
 exactly the same, it's only the genetics 


17
00:01:20.923 --> 00:01:22.640
that are completely different.

18
00:01:23.270 --> 00:01:26.758
But we don't have a tool 
yet to assign species.


19
00:01:27.530 --> 00:01:32.570
 The way we have to do it is we have to 
combine morphological data, ecological data,


20
00:01:32.770 --> 00:01:36.600
 behavioural data with genetic
 data to assign species.


21
00:01:37.710 --> 00:01:42.174
And this genetics will require a 
lot of efforts for the future. 


22
00:01:43.074 --> 00:01:48.130
For now we base our systematics of 
placozoans on simple markers like 16sRNA


23
00:01:48.430 --> 00:01:53.794
 for example, so we have 16sRNA trees 
showing a huge diversity within placozoans


24
00:01:54.094 --> 00:02:00.204
 showing huge genetic distances between 
different species in clades. In other words


25
00:02:00.504 --> 00:02:05.525
we don't only have different species of 
placozoans - we also have different genera


26
00:02:05.825 --> 00:02:08.414
 different families and probably 
different orders


27
00:02:08.670 --> 00:02:11.243
of placozoans within the phylum Placozoa.

28
00:02:12.343 --> 00:02:19.299
While all placozoans are looking almost 
identical, there's one huge exception


29
00:02:19.595 --> 00:02:25.103
and that is <i>Polyplacotoma mediterranea</i>,
and as the name says, <i>Polyplacotoma</i>


30
00:02:25.403 --> 00:02:31.889
it branches off in different arms 
and is not just a plate


31
00:02:32.989 --> 00:02:38.017
 It's more. It almost looks like growing 
tentacles in all different directions. 


32
00:02:38.220 --> 00:02:43.596
This species comes from rocks in the 
Mediterranean where there's high current


33
00:02:44.096 --> 00:02:51.079
and so breaking waves, and this species 
obviously can withstand the force of water 


34
00:02:51.700 --> 00:02:54.342
of breaking waves, high water velocities. 

35
00:02:54.642 --> 00:02:56.728
It's very hard to culture in the lab.

36
00:02:57.028 --> 00:03:00.300
And another most exciting
 thing about this species is


37
00:03:00.700 --> 00:03:05.782
it looks to be the sister species 
to all other placozoans.


38
00:03:06.682 --> 00:03:12.029
﻿So this might be the ancestral placozoan
 and we have sequenced the whole genome


39
00:03:12.790 --> 00:03:18.198
 It will be exciting what this species can
 add to understanding of the genetics and


40
00:03:18.498 --> 00:03:23.634
 the evolution of placozoans 
and the role of placozoans 


41
00:03:23.934 --> 00:03:25.878
for the evolution of metazoan animals. 

42
00:03:26.078 --> 00:03:30.893
And one of these transitions we're 
gonna see is the Placula Hypothesis


43
00:03:31.340 --> 00:03:33.740
we have put at the end of this chapter.

44
00:03:35.110 --> 00:03:40.980
So most morphologic and genetic 
evidence points to the Placula Hypothesis


45
00:03:41.870 --> 00:03:47.528
the idea that placozoans or the placula are
at the very beginning of Metazoan evolution


46
00:03:47.758 --> 00:03:53.015
So if we look at the side now of a 
Trichoplax we see in the red line 


47
00:03:53.315 --> 00:03:59.530
the region where we express genes 
that are the animal's polarity. 


48
00:04:00.335 --> 00:04:07.320
So top-bottom polarity originating 
from the cells in the red area here.


49
00:04:08.270 --> 00:04:13.688
And if we look at <i>Trichoplax</i> now, the 
feeding behaviour we have seen before 


50
00:04:14.464 --> 00:04:20.654
just let's imagine <i>Trichoplax</i> is feeding,
 forming its extracorporeal feeding cavity


51
00:04:20.866 --> 00:04:26.275
so it lifts up the centre of its body and lifts
it up more than it would do for feeding 


52
00:04:26.570 --> 00:04:29.400
in an evolutionary timespin now

53
00:04:30.120 --> 00:04:36.128
and what we get is a bell shape, and if 
we imagine that we need extra structures


54
00:04:36.388 --> 00:04:42.600
for a new bauplan, well one way to do it, 
we could just double the regulatory genes


55
00:04:42.900 --> 00:04:46.390
 the parahox gene trox-2 in 
this case, for example.


56
00:04:47.540 --> 00:04:49.830
and then we might get

57
00:04:50.440 --> 00:04:55.480
uh ready to form extra structures 
now that we have doubled the


58
00:04:56.330 --> 00:04:58.310
gene, we have two

59
00:04:59.600 --> 00:05:06.564
parahox genes now and one sets up polarity
the other sets up tentacles in this case


60
00:05:07.151 --> 00:05:11.417
So now we have a symmetrical bauplan, 
the radial symmetric bauplan 


61
00:05:11.717 --> 00:05:18.249
it's the typical cnidarian bauplan, so this
would be the most parsimonious, easiest way 


62
00:05:18.549 --> 00:05:22.564
to derive the cnidarian 
bauplan from the placula.


63
00:05:23.880 --> 00:05:28.610
So we have seen how we could derive the 
cnidarian bauplan from a placozoan bauplan


64
00:05:28.910 --> 00:05:34.940
 from the placula. But how do we derive 
the sponge bauplan, the poriferans?


65
00:05:35.540 --> 00:05:39.931
Well they look completely different, they
 lost all their symmetry. On the beginning


66
00:05:40.231 --> 00:05:43.467
it would be the same, we have a placula﻿


67
00:05:43.767 --> 00:05:46.968
 we have the top-bottom orientation, 
we have the polarity 


68
00:05:47.268 --> 00:05:50.358
we have in the middle in the red line﻿


69
00:05:50.658 --> 00:05:55.582
the gene expression of the polarity
 gene, maybe trox-2


70
00:05:55.882 --> 00:06:00.232
we have the placula and the placozoans

71
00:06:00.532 --> 00:06:06.612
lifting up the centre of the body for 
feeding, we do the same thing here


72
00:06:06.900 --> 00:06:12.498
as you have seen before, we lifted up, we
 formed the extracorporeal feeding cavity


73
00:06:12.798 --> 00:06:15.964
 we get this bell-shaped bauplan.

74
00:06:16.264 --> 00:06:22.222
With this bell-shaped bauplan we keep 
going as we have done it via the cnidarians


75
00:06:22.522 --> 00:06:26.160
but now in sharp contrast to the cnidarians


76
00:06:26.460 --> 00:06:31.369
sponges, they don't have any symmetries,
 they don't build any other organs. 


77
00:06:31.669 --> 00:06:36.512
So what we will do here, we just get rid of
the polarity gene, we don't need it anymore


78
00:06:36.931 --> 00:06:41.034
We don't need extra organs, we don't need
 polarity anymore. We don't need symmetry, 


79
00:06:41.334 --> 00:06:45.055
so we can just get rid of it. And 
if you just get rid of this gene


80
00:06:45.355 --> 00:06:52.063
﻿all we need to do is punch some holes
 into the bell and if we do this, well


81
00:06:52.363 --> 00:06:57.328
we more or less have a basic 
sponge bauplan and it will be


82
00:06:57.928 --> 00:07:02.790
the easiest way to explain the deviation﻿


83
00:07:03.780 --> 00:07:08.860
of a sponge bauplan from
 a placozoan bauplan﻿.


84
00:07:09.160 --> 00:07:13.940
So that's one way to think about 
deriving sponges from the placula.


